Source code for glotaran.builtin.io.csv.csv

from __future__ import annotations

import pandas as pd

from glotaran.io import ProjectIoInterface
from glotaran.io import register_project_io
from glotaran.parameter import ParameterGroup


[docs]@register_project_io(["csv"])
class CsvProjectIo(ProjectIoInterface):
[docs]    def load_parameters(self, file_name: str) -> ParameterGroup:
        df = pd.read_csv(file_name, skipinitialspace=True, na_values=["None", "none"])
        return ParameterGroup.from_dataframe(df, source=file_name)

[docs]    def save_parameters(self, parameters: ParameterGroup, file_name: str, *, sep=","):
        """Save a :class:`ParameterGroup` to a CSV file."""
        parameters.to_dataframe().to_csv(file_name, na_rep="None", index=False, sep=sep)